Information for 1-GATCAGTATG (Motif 2)

A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G
Reverse Opposite:
A G T C C T G A A C G T C G T A G T A C A G C T A C T G G T C A C G A T A G T C
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.785
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif89.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.8 +/- 30.0bp
Average Position of motif in Background48.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATCAGTATG
DCTCAGCAGG
 A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATCAGTATG-----
GAACADWATGTTCTT
 A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATCAGTATG-----
GRACAGWMTGTYCTB
 A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATCAGTATG----
NAGAACAGNCTGTNCT
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTATG---
VAGRACAKNCTGTBC
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTATG---
GAGCACAGCAGGACA
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GATCAGTATG-----
AGNACANNNTGTNCTN
 A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTATG-----
GGGAACACAATGTTCCC
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTATG---
CCACACAGCAGGAGA
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATCAGTATG-----
GGGTACATAATGTTCCC
 A C G T A C G T A C T G G C T A A C G T A G T C C T G A A C T G C G A T T G C A A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C