Information for 10-WCTCYCAGKGCACACA (Motif 14)

C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G C G A T A C T G A C G T A T C G A T G C G T C A A T G C C G A T A C T G C T A G A C T G C G T A A T C G C G T A
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.749
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 23.9bp
Average Position of motif in Background39.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA--
-NNNVCTGWGYAAACASN
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA
NGTCCCNNGGGA----
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---WCTCYCAGKGCACACA
ACCACTCTCGGTCAC----
 A C G T A C G T A C G T C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA
ATTCCCAAGGGAAT--
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WCTCYCAGKGCACACA
HTTTCCCASG-------
 A C G T C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA-----
-----CGAAGCACACAAAATA
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA
GTCCCCAGGGGA----
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA-----
-----AGCGGCACACACGCAA
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WCTCYCAGKGCACACA---
--TACATGTGCACATAAAA
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:WCTCYCAGKGCACACA--
--TGCCAAAATAAACANN
 C G A T A T G C A C G T A G T C A G T C A G T C C G T A A T C G C A G T A T C G A T G C G T C A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A