Information for 2-TTTGCAGCTT (Motif 10)

A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
Reverse Opposite:
G C T A G T C A T A C G A G T C A G C T C T A G A T G C C G T A T G C A C G T A
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif169.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets51.9 +/- 28.1bp
Average Position of motif in Background53.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTGCAGCTT
TTTGCGGTTT
 A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCAGCTT
ATTTGCATAT-
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTGCAGCTT
TTMACACCTT
 A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTGCAGCTT
TTCATTTGCATAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAGCTT---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTGCAGCTT-
-TTGCAACATN
 A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCAGCTT
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTGCAGCTT
ATTTGCATAA-
 A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAGCTT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCAGCTT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C T G A A C T G A T G C C A G T C G A T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T