Information for 3-CAGGATTTTGAGC (Motif 7)

A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A G T C A C G T A C G T A A C G T G T A C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGATTTTGAGC--
ATTGGACTTTGACCCC
 A C G T A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATTTTGAGC
ANCAGGATGT-----
 A C G T A C G T A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGATTTTGAGC---
-TGGACTTTGNNCTCN
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGATTTTGAGC----
-TGGACTTTGNNCTNTG
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGGATTTTGAGC
NGGGATTA-----
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGGATTTTGAGC
CCWGGAATGY----
 A C G T A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGGATTTTGAGC----
-NNNNTTGTGTGCTTNN
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAGGATTTTGAGC
AAGTCAGCANTTTTN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGATTTTGAGC-
--GWAAYHTGABMC
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGGATTTTGAGC----
GACGATAATGAGCTTGC
 A G T C C G T A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C