p-value: | 1e-8 |
log p-value: | -2.022e+01 |
Information Content per bp: | 1.779 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 13.9 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 47.1 +/- 25.9bp |
Average Position of motif in Background | 54.6 +/- 25.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGGWAWCAAASG SCCTAGCAACAG--- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTGGWAWCAAASG GGTCTGGCAT------ |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGWAWCAAASG-- NNNGTAACTANGNNA |
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Sox3/MA0514.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTGGWAWCAAASG ---AAAACAAAGG |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGWAWCAAASG---- AGAAGAACAAAGGACTA |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGGWAWCAAASG---- ATAAGAACAAAGGACTA |
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SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGGWAWCAAASG---- NNCCTGNAAAAAAAAAAAAA |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CTGGWAWCAAASG------ NNTNGNNGTAACCAAGNNNNAGN |
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Sox2/MA0143.3/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTGGWAWCAAASG -----AACAAAGG |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTGGWAWCAAASG ---GGAACAAAGR |
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