Information for 4-KYTRACCTCT (Motif 22)

A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T
Reverse Opposite:
T C G A A C T G C G T A A T C G A T C G A G C T G A C T G T C A C T A G T G C A
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.656
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.52%
Number of Background Sequences with motif1464.7
Percentage of Background Sequences with motif2.98%
Average Position of motif in Targets50.0 +/- 26.8bp
Average Position of motif in Background47.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:KYTRACCTCT
--TGACCYCT
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:KYTRACCTCT
--TGACCTYA
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--KYTRACCTCT-
CNNTTGACCTTTG
 A C G T A C G T A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---KYTRACCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:KYTRACCTCT-
-CTGACCTTTG
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KYTRACCTCT
--TGACCT--
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KYTRACCTCT
-GTGACCTT-
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--KYTRACCTCT----
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KYTRACCTCT--
--TGACCTTGAT
 A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--KYTRACCTCT----
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G T C A C G T C T G A T C G A A T G C A T G C C G A T G T A C A G C T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A