Information for 10-RTGYAGACACCACTGS (Motif 12)

T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
Reverse Opposite:
A T G C T G A C C T G A T C A G A G C T A C T G T C A G C G A T A C T G A C G T G T A C C G A T T C G A G T A C G T C A A G T C
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.726
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.3 +/- 11.4bp
Average Position of motif in Background51.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTGYAGACACCACTGS
--CCAGACRSVB----
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RTGYAGACACCACTGS
--BCAGACWA------
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------RTGYAGACACCACTGS
NNNVCTGWGYAAACASN-----
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:RTGYAGACACCACTGS
--CCAGACAG------
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RTGYAGACACCACTGS
-DGTAAACA-------
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RTGYAGACACCACTGS
CAAATCCAGACATCACA--
 A C G T A C G T A C G T T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RTGYAGACACCACTGS
GGTGYTGACAGS-----
 A C G T T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RTGYAGACACCACTGS
CGTCTAGACA-------
 A C G T T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RTGYAGACACCACTGS
-TGTAAACAGGA----
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RTGYAGACACCACTGS
NNGGCGACACCTCNNN
 T C A G A C G T A C T G A G C T C G T A A C T G C G T A G T A C C G T A A G T C G T A C C T G A A G T C A G C T A C T G A T C G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C