Information for 9-AGGCATKGMCYTRGAM (Motif 11)

G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
Reverse Opposite:
A C G T C G A T A G T C A G C T G T C A C T A G A C T G A C T G A G T C G T A C G T C A A C G T A C T G A T G C G T A C C A G T
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.731
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.9 +/- 27.7bp
Average Position of motif in Background44.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCATKGMCYTRGAM
NAGGTCANTGACCT----
 A C G T A C G T G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGGCATKGMCYTRGAM
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGCATKGMCYTRGAM
--CCATTGTTTT----
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGCATKGMCYTRGAM
TGACCTTGACCT----
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGCATKGMCYTRGAM
TGACCTTGACCT----
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGGCATKGMCYTRGAM
GGTTGGCAT----------
 A C G T A C G T A C G T G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGGCATKGMCYTRGAM
-GGGATTGCATNN---
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGGCATKGMCYTRGAM
--TCAGNGAGCGTGAC
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGGCATKGMCYTRGAM
NGTGGGCAT----------
 A C G T A C G T A C G T G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGGCATKGMCYTRGAM
----NATGACCTTGA-
 G T C A A C T G A T C G A G T C C G T A A C G T A C T G A C T G G T A C G T A C A G T C A C G T C T G A C T A G C G T A G T C A
A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T