Information for 1-CAWGCCCAGTGGRCCA (Motif 1)

A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
Reverse Opposite:
C G A T A C T G A T C G A G C T A T G C A G T C C T G A A T G C C G A T T A C G C A T G A T C G G T A C C G T A A C G T A C T G
p-value:1e-14
log p-value:-3.357e+01
Information Content per bp:1.704
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.1 +/- 20.2bp
Average Position of motif in Background49.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAWGCCCAGTGGRCCA
--TGCCCAGNHW----
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAWGCCCAGTGGRCCA
--TGCCCTGAGGGCA-
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAWGCCCAGTGGRCCA
--TGCCCTNAGGGCA-
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAWGCCCAGTGGRCCA
GTAGGTCACTGGGTCA
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAWGCCCAGTGGRCCA
BTCAAGGTCA--------
 A C G T A C G T A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAWGCCCAGTGGRCCA
AAGTTCAAGGTCAGC------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAWGCCCAGTGGRCCA
NTCAAGGTCA--------
 A C G T A C G T A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAWGCCCAGTGGRCCA
--TGCCCTGAGGGCA-
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAWGCCCAGTGGRCCA
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAWGCCCAGTGGRCCA
-NTGCCCANNGGTNA-
 A G T C G T C A G C A T C A T G A T G C G A T C A G T C C G T A A T C G G A C T C T A G A T C G T C G A A T G C G T A C G C T A
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T