Information for 23-ACGTAAAGCA (Motif 30)

C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T A C G T G T C A A G T C A C T G A C G T
p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.942
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.3 +/- 28.3bp
Average Position of motif in Background52.9 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAGCA
TTACGTAA----
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:2
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ACGTAAAGCA
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ACGTAAAGCA
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACGTAAAGCA
BGCACGTA-----
 A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACGTAAAGCA
TATGACGTAA----
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAGCA
NGYCATAAAWCH
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACGTAAAGCA
AGTCGTAAAAA-
 A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACGTAAAGCA-
CAAACGTAAACAAT
 A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACGTAAAGCA-
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACGTAAAGCA-
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C G T A G T C A C G T A A C T G A G T C C G T A A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T