Information for 11-CAGGGAAGGTGTCACA (Motif 21)

A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G C G T A T A G C C G T A A G T C A G T C C G A T A C G T A G T C A G T C A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 29.2bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA
------AGGTGTCA--
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA
------AGGTGTGAAM
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA
-----AAGGTGTGAAA
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA
------AGGTGTGA--
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGAAGGTGTCACA
TCAGNGAGCGTGAC---
 A C G T A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGGGAAGGTGTCACA---
--TNNNNGGTGTCATNTNT
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA
------AGGTGTGA--
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGAAGGTGTCACA
GAAAGTGAAAGT------
 A C G T A C G T A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA--
-----AAGGTGTGAAAAT
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGGAAGGTGTCACA--
--GCGGAGGTGTCGCCTC
 A G T C C G T A A C T G A C T G A C T G C G T A C G T A C T A G A C T G A C G T A C T G C G A T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C