Information for 1-CTCTGTAGGGTGC (Motif 2)

A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
T A C G A G T C C G T A G T A C G T A C A G T C G A C T C T G A A T G C C G T A A C T G C G T A A T C G
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.7 +/- 11.2bp
Average Position of motif in Background54.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCTGTAGGGTGC
GTCTGTGGTTT--
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTAGGGTGC-
DCHCAGCAGGRGGCC
 A C G T A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTAGGGTGC-
NCNCAGCGGGGGGTC
 A C G T A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC-
CTTCGTGGGGGGTC
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC
NNHTGTGGTTWN-
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC-
----GTGGGGTGAT
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC---
----GTGGCGTGACNG
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC-
CTTCGCGGGGGGTC
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC-
----ATGGGGTGAT
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTCTGTAGGGTGC
--CTGTGGTTTN-
 A T G C A C G T G T A C A C G T A T C G A G C T C T G A A C T G A C T G A C T G A C G T A C T G A G T C
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T