Information for 1-GGRACTGCAGAGGAGS (Motif 1)

A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
Reverse Opposite:
T A C G A G T C G A C T A G T C A G T C A C G T A G T C A C G T C T A G A G T C C G T A A C T G A C G T A G C T A T G C A G T C
p-value:1e-14
log p-value:-3.369e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 20.4bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGRACTGCAGAGGAGS-
NNNANTGCAGTGCNNTT
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGRACTGCAGAGGAGS
CCCCCTGCTGTG----
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGRACTGCAGAGGAGS
---ACWTCAAAGG---
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGRACTGCAGAGGAGS
AGAGRRACAGCWGAC----
 A C G T A C G T A C G T A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGRACTGCAGAGGAGS
---CCTGCTGAGH---
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGRACTGCAGAGGAGS
GGCCYCCTGCTGDGH---
 A C G T A C G T A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GGRACTGCAGAGGAGS
--------AGAGGAA-
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGRACTGCAGAGGAGS
----BTBRAGTGSN--
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGRACTGCAGAGGAGS
TNTCCTGCTGTGNNG-
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGRACTGCAGAGGAGS-----
-NNCCTGNAAAAAAAAAAAAA
 A C T G T A C G T C A G G T C A G T A C A C G T A C T G A G T C C G T A A C T G C G T A A C T G C T A G C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A