Information for 6-CAMTGCTGTAATG (Motif 8)

A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
Reverse Opposite:
A G T C G T C A A G C T A G C T G C T A A G T C C G T A A C T G A G T C C G T A A C G T C G A T C T A G
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.773
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif37.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.5 +/- 21.8bp
Average Position of motif in Background50.7 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAMTGCTGTAATG---
AGGACGCTGTAAAGGGA
 A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAMTGCTGTAATG---
AAGACGCTGTAAAGCGA
 A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAMTGCTGTAATG---
AAGACGCTGTAAAGCGA
 A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAMTGCTGTAATG
----GCTGTG---
 A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAMTGCTGTAATG
--ATGATGCAAT-
 A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAMTGCTGTAATG
CCCCCTGCTGTG---
 A C G T A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAMTGCTGTAATG
---NGCTN-----
 A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAMTGCTGTAATG
--MTGATGCAAT-
 A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAMTGCTGTAATG
AAAWWTGCTGACWWD
 A C G T A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAMTGCTGTAATG
AATTTGCTGAC---
 A C G T A G T C C G T A T G C A C G A T A C T G A G T C A C G T A C T G C G A T C T G A C T G A A C G T C T A G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T