Information for 9-CGCCGCCGGC (Motif 21)

G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C
Reverse Opposite:
T A C G T A G C A T G C T A C G T A C G A T G C T C A G T C A G T A G C C A T G
p-value:1e-4
log p-value:-1.090e+01
Information Content per bp:1.652
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif1132.7
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets49.8 +/- 26.4bp
Average Position of motif in Background50.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCCGGC---
ANTGCCTGAGGCAAN
 A C G T A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCCGCCGGC-
CGCCTCAGGCA
 G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCCGCCGGC-
AGCCTCAGGCA
 G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCCGCCGGC-
AGCCTCAGGCA
 G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCCGGC---
NTNGCCTCAGGCNNN
 A C G T A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGCCGGC-
GCTCCGCCCMCY
 A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCCGGC---
NTCCCCTCAGGGANT
 A C G T A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCCGGC
AGCGCGCC---
 A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCGGC---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCGGC
CCCCCGCCCCCGCC
 A C G T A C G T A C G T A C G T G T A C A T C G A G T C A G T C T A C G A T G C A T G C T A C G A T C G A T G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C