Information for 9-GCCCTGGAGTGGC (Motif 12)

A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A A C T G C T A G A T C G A G T C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 29.9bp
Average Position of motif in Background73.4 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCCCTGGAGTGGC
---BTBRAGTGSN
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGAGTGGC-
---CTTGAGTGGCT
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGAGTGGC
---CTYRAGTGSY
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCCCTGGAGTGGC-
----TTGAGTGSTT
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCCCTGGAGTGGC-
----TTRAGTGSYK
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGAGTGGC
---NTCAAGTGG-
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGAGTGGC---
NNNANTGCAGTGCNNTT
 A C G T A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCCTGGAGTGGC
--CCWGGAATGY-
 A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTGGAGTGGC
NTGCCCANNGGTNA-
 A C G T A C G T A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGGAGTGGC-----
TGACCTAAAGTAACCTCTG
 A C G T A C T G A T G C A G T C A G T C A C G T A C T G A C T G C G T A A C T G C G A T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G