Information for 3-GACCTACCTC (Motif 11)

T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
Reverse Opposite:
C T A G C G T A C T A G A C T G A G C T C G T A A C T G A T C G A C G T A G T C
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif84.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets32.5 +/- 20.8bp
Average Position of motif in Background53.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC
NNACTTACCTN
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACCTACCTC--
TTGACCTANTTATN
 A C G T A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC
TGACCTARTT-
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GACCTACCTC--
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC
TGACCTTGAT-
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC
TGACCT-----
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC
NNACTTGCCTT
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACCTACCTC-
-RYHYACCTGB
 T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACCTACCTC-
KGCCCTTCCCCA
 A C G T T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACCTACCTC
CACATTCCAT
 T C A G G T C A A T G C T A G C C G A T C T G A A G T C G A T C A C G T A G T C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T