Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 847)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 50625)	% of Background Sequences with Motif
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-122	-2.821e+02	0.0000	75.0	8.85%	40.5	0.08%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-42	-9.702e+01	0.0000	76.0	8.97%	540.5	1.13%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-28	-6.558e+01	0.0000	55.0	6.49%	431.6	0.90%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-28	-6.544e+01	0.0000	87.0	10.27%	1153.1	2.40%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-27	-6.337e+01	0.0000	78.0	9.21%	958.9	2.00%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-25	-5.809e+01	0.0000	83.0	9.80%	1176.2	2.45%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-24	-5.734e+01	0.0000	63.0	7.44%	687.3	1.43%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-23	-5.501e+01	0.0000	81.0	9.56%	1179.5	2.46%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-23	-5.470e+01	0.0000	69.0	8.15%	869.4	1.81%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-23	-5.313e+01	0.0000	73.0	8.62%	998.1	2.08%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-22	-5.154e+01	0.0000	57.0	6.73%	627.1	1.31%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-21	-4.869e+01	0.0000	85.0	10.04%	1426.9	2.97%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-17	-3.961e+01	0.0000	125.0	14.76%	3077.1	6.40%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-17	-3.938e+01	0.0000	46.0	5.43%	540.2	1.12%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-16	-3.848e+01	0.0000	41.0	4.84%	437.5	0.91%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-15	-3.487e+01	0.0000	114.0	13.46%	2854.8	5.94%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-12	-2.791e+01	0.0000	80.0	9.45%	1868.3	3.89%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-11	-2.714e+01	0.0000	25.0	2.95%	230.7	0.48%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-10	-2.509e+01	0.0000	115.0	13.58%	3362.5	7.00%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-10	-2.410e+01	0.0000	25.0	2.95%	266.8	0.56%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-9	-2.177e+01	0.0000	90.0	10.63%	2521.1	5.25%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-8	-2.070e+01	0.0000	30.0	3.54%	445.5	0.93%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-8	-2.018e+01	0.0000	37.0	4.37%	660.4	1.37%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-8	-1.953e+01	0.0000	120.0	14.17%	3919.0	8.16%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-8	-1.852e+01	0.0000	84.0	9.92%	2452.5	5.10%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-7	-1.617e+01	0.0000	65.0	7.67%	1811.3	3.77%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-6	-1.492e+01	0.0000	59.0	6.97%	1637.1	3.41%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-6	-1.426e+01	0.0000	17.0	2.01%	219.2	0.46%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-6	-1.389e+01	0.0000	100.0	11.81%	3448.5	7.18%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-5	-1.341e+01	0.0000	122.0	14.40%	4496.6	9.36%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-5	-1.287e+01	0.0000	38.0	4.49%	928.6	1.93%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-5	-1.202e+01	0.0001	55.0	6.49%	1634.1	3.40%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-3	-9.008e+00	0.0014	9.0	1.06%	104.2	0.22%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-3	-8.952e+00	0.0014	8.0	0.94%	82.7	0.17%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-3	-8.903e+00	0.0014	5.0	0.59%	27.2	0.06%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-3	-8.451e+00	0.0022	19.0	2.24%	416.5	0.87%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-3	-8.181e+00	0.0028	23.0	2.72%	569.3	1.18%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-3	-7.279e+00	0.0066	13.0	1.53%	253.0	0.53%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-2	-6.785e+00	0.0106	32.0	3.78%	998.5	2.08%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-2	-6.686e+00	0.0114	49.0	5.79%	1749.7	3.64%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-6.442e+00	0.0141	68.0	8.03%	2655.3	5.53%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-6.329e+00	0.0155	30.0	3.54%	943.6	1.96%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-2	-6.107e+00	0.0189	42.0	4.96%	1483.4	3.09%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e-2	-5.747e+00	0.0264	5.0	0.59%	55.4	0.12%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-2	-5.733e+00	0.0264	47.0	5.55%	1744.5	3.63%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-2	-5.439e+00	0.0344	86.0	10.15%	3656.4	7.61%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-2	-5.292e+00	0.0390	31.0	3.66%	1059.4	2.21%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-2	-5.225e+00	0.0408	4.0	0.47%	39.7	0.08%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-2	-5.037e+00	0.0482	8.0	0.94%	153.1	0.32%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-2	-4.735e+00	0.0639	16.0	1.89%	459.5	0.96%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-2	-4.661e+00	0.0675	217.0	25.62%	10648.6	22.16%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-4.596e+00	0.0706	24.0	2.83%	804.5	1.67%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-4.494e+00	0.0767	94.0	11.10%	4206.1	8.76%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1	-4.492e+00	0.0767	64.0	7.56%	2700.0	5.62%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-4.400e+00	0.0813	7.0	0.83%	138.4	0.29%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-4.313e+00	0.0871	34.0	4.01%	1279.5	2.66%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-4.185e+00	0.0972	3.0	0.35%	29.1	0.06%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-4.095e+00	0.1045	25.0	2.95%	887.1	1.85%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-4.040e+00	0.1085	5.0	0.59%	84.8	0.18%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-4.028e+00	0.1085	69.0	8.15%	3017.1	6.28%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-3.996e+00	0.1097	49.0	5.79%	2030.2	4.23%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-3.963e+00	0.1115	15.0	1.77%	461.3	0.96%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-1	-3.953e+00	0.1115	212.0	25.03%	10564.9	21.99%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-3.938e+00	0.1115	20.0	2.36%	677.7	1.41%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-3.937e+00	0.1115	6.0	0.71%	118.6	0.25%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-3.776e+00	0.1264	11.0	1.30%	308.4	0.64%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-3.738e+00	0.1293	5.0	0.59%	91.3	0.19%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-3.721e+00	0.1296	12.0	1.42%	351.4	0.73%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-3.502e+00	0.1590	35.0	4.13%	1412.8	2.94%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-1	-3.494e+00	0.1590	27.0	3.19%	1033.2	2.15%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-3.491e+00	0.1590	18.0	2.13%	622.8	1.30%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-3.461e+00	0.1590	36.0	4.25%	1465.0	3.05%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.321e+00	0.1801	5.0	0.59%	102.4	0.21%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.267e+00	0.1875	24.0	2.83%	915.5	1.91%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-3.261e+00	0.1875	103.0	12.16%	4913.8	10.23%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-1	-3.244e+00	0.1875	21.0	2.48%	778.0	1.62%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-1	-3.235e+00	0.1875	25.0	2.95%	965.2	2.01%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-1	-3.229e+00	0.1875	89.0	10.51%	4187.3	8.72%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-3.209e+00	0.1875	39.0	4.60%	1643.0	3.42%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e-1	-3.207e+00	0.1875	28.0	3.31%	1110.3	2.31%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-1	-3.185e+00	0.1875	24.0	2.83%	923.8	1.92%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-3.118e+00	0.1964	50.0	5.90%	2204.2	4.59%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-3.105e+00	0.1965	8.0	0.94%	221.1	0.46%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-1	-3.073e+00	0.2005	11.0	1.30%	346.7	0.72%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-1	-3.072e+00	0.2005	29.0	3.42%	1173.5	2.44%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-3.054e+00	0.2005	106.0	12.51%	5119.6	10.66%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-3.048e+00	0.2005	47.0	5.55%	2064.9	4.30%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e-1	-2.970e+00	0.2123	24.0	2.83%	945.4	1.97%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-1	-2.948e+00	0.2146	25.0	2.95%	995.3	2.07%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-2.943e+00	0.2146	60.0	7.08%	2742.0	5.71%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-2.938e+00	0.2146	8.0	0.94%	229.1	0.48%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-1	-2.831e+00	0.2332	7.0	0.83%	194.8	0.41%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-2.778e+00	0.2432	87.0	10.27%	4181.2	8.70%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.686e+00	0.2638	71.0	8.38%	3362.6	7.00%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-2.591e+00	0.2873	82.0	9.68%	3961.9	8.25%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-1	-2.566e+00	0.2913	4.0	0.47%	90.0	0.19%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-1	-2.520e+00	0.3019	102.0	12.04%	5041.3	10.49%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-1	-2.513e+00	0.3019	97.0	11.45%	4776.1	9.94%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-2.425e+00	0.3254	16.0	1.89%	621.0	1.29%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-1	-2.418e+00	0.3254	11.0	1.30%	390.8	0.81%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-2.406e+00	0.3254	19.0	2.24%	766.5	1.60%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.340e+00	0.3438	11.0	1.30%	396.3	0.82%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-2.284e+00	0.3601	14.0	1.65%	540.9	1.13%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-2.270e+00	0.3616	42.0	4.96%	1939.7	4.04%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.240e+00	0.3691	70.0	8.26%	3410.1	7.10%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.229e+00	0.3698	13.0	1.53%	498.3	1.04%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.204e+00	0.3756	7.0	0.83%	227.6	0.47%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.198e+00	0.3756	40.0	4.72%	1849.7	3.85%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.173e+00	0.3801	54.0	6.38%	2582.3	5.38%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-2.145e+00	0.3874	59.0	6.97%	2851.6	5.94%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.134e+00	0.3880	289.0	34.12%	15450.4	32.16%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.126e+00	0.3880	33.0	3.90%	1502.0	3.13%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-2.114e+00	0.3890	10.0	1.18%	368.2	0.77%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-2.114e+00	0.3890	50.0	5.90%	2385.5	4.97%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-2.075e+00	0.3973	26.0	3.07%	1154.2	2.40%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-2.074e+00	0.3973	34.0	4.01%	1562.9	3.25%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-2.046e+00	0.4022	58.0	6.85%	2821.3	5.87%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-2.007e+00	0.4146	24.0	2.83%	1063.1	2.21%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.990e+00	0.4181	23.0	2.72%	1015.2	2.11%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.972e+00	0.4223	11.0	1.30%	427.3	0.89%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.966e+00	0.4223	24.0	2.83%	1069.8	2.23%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.954e+00	0.4226	41.0	4.84%	1947.6	4.05%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.859e+00	0.4609	28.0	3.31%	1290.2	2.69%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.835e+00	0.4687	54.0	6.38%	2659.6	5.54%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.791e+00	0.4858	96.0	11.33%	4933.1	10.27%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.781e+00	0.4867	64.0	7.56%	3207.1	6.68%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.780e+00	0.4867	10.0	1.18%	397.1	0.83%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.778e+00	0.4867	3.0	0.35%	80.7	0.17%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.761e+00	0.4867	62.0	7.32%	3105.4	6.46%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.707e+00	0.5077	10.0	1.18%	404.3	0.84%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.663e+00	0.5268	62.0	7.32%	3132.9	6.52%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.652e+00	0.5286	32.0	3.78%	1536.1	3.20%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.644e+00	0.5290	96.0	11.33%	4983.0	10.37%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.636e+00	0.5290	15.0	1.77%	660.7	1.38%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.614e+00	0.5367	68.0	8.03%	3470.0	7.22%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.607e+00	0.5367	32.0	3.78%	1545.5	3.22%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.599e+00	0.5372	10.0	1.18%	415.3	0.86%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.582e+00	0.5424	7.0	0.83%	271.7	0.57%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-1.570e+00	0.5449	7.0	0.83%	272.3	0.57%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.550e+00	0.5521	45.0	5.31%	2249.3	4.68%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.520e+00	0.5647	71.0	8.38%	3662.2	7.62%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.518e+00	0.5647	24.0	2.83%	1142.4	2.38%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-1.516e+00	0.5647	23.0	2.72%	1090.6	2.27%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.511e+00	0.5647	30.0	3.54%	1459.6	3.04%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.511e+00	0.5647	4.0	0.47%	136.7	0.28%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.508e+00	0.5647	103.0	12.16%	5416.4	11.27%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.479e+00	0.5647	21.0	2.48%	992.3	2.07%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.475e+00	0.5647	79.0	9.33%	4113.2	8.56%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.459e+00	0.5679	12.0	1.42%	531.9	1.11%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.450e+00	0.5690	13.0	1.53%	583.6	1.21%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.444e+00	0.5691	3.0	0.35%	95.3	0.20%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.434e+00	0.5707	27.0	3.19%	1316.6	2.74%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.400e+00	0.5865	24.0	2.83%	1164.8	2.42%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.375e+00	0.5976	5.0	0.59%	192.4	0.40%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.360e+00	0.6026	33.0	3.90%	1652.2	3.44%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.345e+00	0.6078	73.0	8.62%	3830.1	7.97%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.344e+00	0.6078	12.0	1.42%	546.2	1.14%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.341e+00	0.6078	13.0	1.53%	598.4	1.25%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.310e+00	0.6175	42.0	4.96%	2150.7	4.48%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.309e+00	0.6175	163.0	19.24%	8829.4	18.38%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.309e+00	0.6175	7.0	0.83%	297.0	0.62%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.309e+00	0.6175	120.0	14.17%	6438.2	13.40%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.305e+00	0.6175	35.0	4.13%	1773.5	3.69%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.300e+00	0.6175	9.0	1.06%	398.7	0.83%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.284e+00	0.6175	127.0	14.99%	6838.4	14.23%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.236e+00	0.6370	25.0	2.95%	1251.2	2.60%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.221e+00	0.6431	16.0	1.89%	774.5	1.61%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.192e+00	0.6575	14.0	1.65%	673.1	1.40%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.181e+00	0.6609	13.0	1.53%	622.4	1.30%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.164e+00	0.6686	10.0	1.18%	467.4	0.97%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.134e+00	0.6852	22.0	2.60%	1112.5	2.32%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.131e+00	0.6852	8.0	0.94%	367.2	0.76%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.119e+00	0.6871	6.0	0.71%	266.0	0.55%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.100e+00	0.6964	11.0	1.30%	529.7	1.10%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.098e+00	0.6964	1.0	0.12%	23.9	0.05%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.094e+00	0.6964	66.0	7.79%	3538.8	7.37%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.087e+00	0.6964	5.0	0.59%	217.6	0.45%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.077e+00	0.6964	18.0	2.13%	909.0	1.89%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.064e+00	0.7017	1.0	0.12%	24.0	0.05%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.041e+00	0.7142	22.0	2.60%	1133.4	2.36%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.037e+00	0.7142	36.0	4.25%	1901.0	3.96%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.037e+00	0.7142	11.0	1.30%	539.1	1.12%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.031e+00	0.7142	71.0	8.38%	3841.6	8.00%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.010e+00	0.7204	3.0	0.35%	122.7	0.26%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-9.864e-01	0.7337	7.0	0.83%	333.9	0.70%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-9.782e-01	0.7358	6.0	0.71%	281.3	0.59%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-9.737e-01	0.7358	24.0	2.83%	1259.1	2.62%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-9.592e-01	0.7420	42.0	4.96%	2258.1	4.70%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-9.485e-01	0.7459	17.0	2.01%	881.3	1.83%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-9.424e-01	0.7466	1.0	0.12%	28.5	0.06%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-9.321e-01	0.7504	57.0	6.73%	3103.9	6.46%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-9.044e-01	0.7674	84.0	9.92%	4626.1	9.63%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-9.040e-01	0.7674	16.0	1.89%	836.9	1.74%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-8.880e-01	0.7720	10.0	1.18%	510.6	1.06%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-8.637e-01	0.7870	56.0	6.61%	3076.2	6.40%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-8.618e-01	0.7870	28.0	3.31%	1513.0	3.15%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-8.542e-01	0.7870	15.0	1.77%	792.1	1.65%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-8.410e-01	0.7929	1.0	0.12%	32.1	0.07%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-8.280e-01	0.7992	15.0	1.77%	798.9	1.66%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-8.261e-01	0.7992	16.0	1.89%	854.6	1.78%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-8.229e-01	0.7992	32.0	3.78%	1748.2	3.64%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-8.025e-01	0.8076	21.0	2.48%	1139.5	2.37%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-7.825e-01	0.8199	3.0	0.35%	142.6	0.30%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-7.803e-01	0.8199	150.0	17.71%	8421.0	17.53%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-7.778e-01	0.8199	33.0	3.90%	1820.1	3.79%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-7.568e-01	0.8290	14.0	1.65%	759.1	1.58%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-7.563e-01	0.8290	163.0	19.24%	9173.2	19.09%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-7.547e-01	0.8290	17.0	2.01%	928.2	1.93%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-7.506e-01	0.8290	9.0	1.06%	480.6	1.00%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-7.416e-01	0.8290	56.0	6.61%	3133.0	6.52%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-7.030e-01	0.8541	31.0	3.66%	1735.1	3.61%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-7.021e-01	0.8541	4.0	0.47%	207.3	0.43%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-7.021e-01	0.8541	4.0	0.47%	207.0	0.43%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-6.965e-01	0.8541	45.0	5.31%	2531.0	5.27%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.945e-01	0.8541	19.0	2.24%	1058.5	2.20%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-6.931e-01	0.8541	27.0	3.19%	1512.6	3.15%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-6.578e-01	0.8689	27.0	3.19%	1525.7	3.18%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.477e-01	0.8737	1.0	0.12%	42.8	0.09%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-6.461e-01	0.8737	18.0	2.13%	1016.9	2.12%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-6.414e-01	0.8737	23.0	2.72%	1303.9	2.71%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-6.227e-01	0.8836	20.0	2.36%	1138.6	2.37%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-6.221e-01	0.8836	11.0	1.30%	622.8	1.30%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.047e-01	0.8917	9.0	1.06%	511.9	1.07%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-6.001e-01	0.8918	5.0	0.59%	280.8	0.58%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-5.966e-01	0.8918	18.0	2.13%	1032.8	2.15%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-5.821e-01	0.8999	14.0	1.65%	806.1	1.68%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-5.714e-01	0.9055	48.0	5.67%	2765.2	5.76%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-5.675e-01	0.9055	37.0	4.37%	2136.2	4.45%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-5.593e-01	0.9086	9.0	1.06%	522.9	1.09%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-5.321e-01	0.9296	2.0	0.24%	112.4	0.23%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-5.202e-01	0.9366	152.0	17.95%	8751.1	18.22%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-5.097e-01	0.9424	47.0	5.55%	2743.8	5.71%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-5.050e-01	0.9428	5.0	0.59%	298.4	0.62%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-5.002e-01	0.9433	2.0	0.24%	116.9	0.24%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-4.953e-01	0.9439	85.0	10.04%	4939.2	10.28%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-4.923e-01	0.9439	29.0	3.42%	1711.6	3.56%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-4.897e-01	0.9439	8.0	0.94%	481.3	1.00%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-4.887e-01	0.9439	22.0	2.60%	1305.0	2.72%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-4.861e-01	0.9439	3.0	0.35%	180.9	0.38%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-4.703e-01	0.9477	26.0	3.07%	1547.3	3.22%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.633e-01	0.9504	2.0	0.24%	121.1	0.25%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-4.555e-01	0.9538	1.0	0.12%	57.6	0.12%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-4.455e-01	0.9595	14.0	1.65%	852.0	1.77%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.449e-01	0.9595	7.0	0.83%	433.6	0.90%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-4.447e-01	0.9595	21.0	2.48%	1266.3	2.64%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-4.435e-01	0.9595	11.0	1.30%	674.1	1.40%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-4.401e-01	0.9595	3.0	0.35%	188.1	0.39%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-4.376e-01	0.9595	11.0	1.30%	676.7	1.41%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-4.359e-01	0.9595	22.0	2.60%	1329.3	2.77%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-4.312e-01	0.9595	15.0	1.77%	917.8	1.91%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-4.303e-01	0.9595	6.0	0.71%	376.6	0.78%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-4.169e-01	0.9595	1.0	0.12%	61.2	0.13%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-4.085e-01	0.9595	16.0	1.89%	986.3	2.05%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-4.079e-01	0.9595	1.0	0.12%	62.7	0.13%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.047e-01	0.9595	35.0	4.13%	2110.2	4.39%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-4.023e-01	0.9595	13.0	1.53%	809.6	1.69%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.021e-01	0.9595	29.0	3.42%	1759.6	3.66%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-3.937e-01	0.9595	65.0	7.67%	3868.5	8.05%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.884e-01	0.9595	4.0	0.47%	262.4	0.55%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-3.842e-01	0.9595	4.0	0.47%	263.4	0.55%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-3.790e-01	0.9595	3.0	0.35%	200.8	0.42%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-3.790e-01	0.9595	144.0	17.00%	8446.9	17.58%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-3.585e-01	0.9671	1.0	0.12%	68.5	0.14%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-3.461e-01	0.9755	44.0	5.19%	2680.3	5.58%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-3.446e-01	0.9755	4.0	0.47%	273.4	0.57%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-3.421e-01	0.9755	2.0	0.24%	141.1	0.29%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-3.248e-01	0.9853	14.0	1.65%	904.9	1.88%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-3.187e-01	0.9876	21.0	2.48%	1332.6	2.77%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-3.177e-01	0.9876	11.0	1.30%	723.1	1.51%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-3.144e-01	0.9876	3.0	0.35%	215.6	0.45%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-3.100e-01	0.9876	7.0	0.83%	476.9	0.99%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-3.031e-01	0.9884	8.0	0.94%	543.0	1.13%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-2.988e-01	0.9889	4.0	0.47%	286.6	0.60%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.947e-01	0.9894	92.0	10.86%	5541.7	11.54%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.923e-01	0.9894	4.0	0.47%	288.0	0.60%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-2.919e-01	0.9894	7.0	0.83%	483.1	1.01%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-2.885e-01	0.9894	21.0	2.48%	1351.6	2.81%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-2.881e-01	0.9894	3.0	0.35%	222.6	0.46%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.831e-01	0.9894	5.0	0.59%	357.0	0.74%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-2.826e-01	0.9894	10.0	1.18%	677.5	1.41%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.816e-01	0.9894	2.0	0.24%	154.8	0.32%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-2.775e-01	0.9894	2.0	0.24%	155.8	0.32%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.755e-01	0.9894	26.0	3.07%	1663.0	3.46%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-2.727e-01	0.9894	24.0	2.83%	1545.0	3.22%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.721e-01	0.9894	20.0	2.36%	1301.8	2.71%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.678e-01	0.9894	7.0	0.83%	493.8	1.03%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-2.655e-01	0.9894	7.0	0.83%	494.3	1.03%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.589e-01	0.9894	4.0	0.47%	299.5	0.62%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-2.575e-01	0.9894	2.0	0.24%	160.5	0.33%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.575e-01	0.9894	2.0	0.24%	160.7	0.33%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.498e-01	0.9894	60.0	7.08%	3717.6	7.74%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-2.427e-01	0.9894	11.0	1.30%	761.4	1.58%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.426e-01	0.9894	1.0	0.12%	87.7	0.18%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-2.359e-01	0.9894	80.0	9.45%	4915.7	10.23%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-2.286e-01	0.9894	2.0	0.24%	168.0	0.35%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-2.285e-01	0.9894	1.0	0.12%	90.4	0.19%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.200e-01	0.9894	5.0	0.59%	382.7	0.80%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.093e-01	0.9908	10.0	1.18%	717.2	1.49%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.065e-01	0.9908	32.0	3.78%	2088.4	4.35%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-2.060e-01	0.9908	15.0	1.77%	1038.6	2.16%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.915e-01	0.9986	1.0	0.12%	99.7	0.21%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.798e-01	1.0000	18.0	2.13%	1249.1	2.60%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.737e-01	1.0000	5.0	0.59%	405.2	0.84%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.690e-01	1.0000	71.0	8.38%	4485.1	9.34%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.677e-01	1.0000	3.0	0.35%	265.5	0.55%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.660e-01	1.0000	124.0	14.64%	7622.9	15.87%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.623e-01	1.0000	19.0	2.24%	1329.5	2.77%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.601e-01	1.0000	25.0	2.95%	1708.1	3.56%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.566e-01	1.0000	96.0	11.33%	5993.4	12.48%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.565e-01	1.0000	5.0	0.59%	415.6	0.87%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.483e-01	1.0000	80.0	9.45%	5060.1	10.53%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.448e-01	1.0000	18.0	2.13%	1284.1	2.67%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.266e-01	1.0000	3.0	0.35%	287.3	0.60%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.209e-01	1.0000	56.0	6.61%	3673.6	7.65%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.194e-01	1.0000	24.0	2.83%	1698.0	3.53%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.122e-01	1.0000	18.0	2.13%	1324.9	2.76%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.082e-01	1.0000	1.0	0.12%	129.8	0.27%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.082e-01	1.0000	1.0	0.12%	129.8	0.27%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.013e-01	1.0000	62.0	7.32%	4082.9	8.50%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-9.424e-02	1.0000	13.0	1.53%	1020.6	2.12%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-9.385e-02	1.0000	4.0	0.47%	388.5	0.81%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-9.153e-02	1.0000	1.0	0.12%	138.3	0.29%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-8.721e-02	1.0000	20.0	2.36%	1493.3	3.11%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-8.588e-02	1.0000	2.0	0.24%	235.0	0.49%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-8.573e-02	1.0000	55.0	6.49%	3695.8	7.69%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-7.807e-02	1.0000	10.0	1.18%	839.3	1.75%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-6.970e-02	1.0000	2.0	0.24%	249.0	0.52%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-6.733e-02	1.0000	4.0	0.47%	416.8	0.87%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-6.403e-02	1.0000	44.0	5.19%	3078.0	6.41%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-6.211e-02	1.0000	8.0	0.94%	723.4	1.51%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-6.000e-02	1.0000	1.0	0.12%	161.2	0.34%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.921e-02	1.0000	30.0	3.54%	2205.0	4.59%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.913e-02	1.0000	2.0	0.24%	259.8	0.54%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-5.785e-02	1.0000	1.0	0.12%	163.9	0.34%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-5.187e-02	1.0000	1.0	0.12%	169.4	0.35%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-5.119e-02	1.0000	67.0	7.91%	4554.2	9.48%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-4.500e-02	1.0000	3.0	0.35%	366.1	0.76%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.387e-02	1.0000	6.0	0.71%	609.2	1.27%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-3.858e-02	1.0000	65.0	7.67%	4495.9	9.36%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-3.849e-02	1.0000	4.0	0.47%	462.5	0.96%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-3.485e-02	1.0000	1.0	0.12%	191.4	0.40%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-3.394e-02	1.0000	24.0	2.83%	1901.2	3.96%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.661e-02	1.0000	12.0	1.42%	1105.1	2.30%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-2.522e-02	1.0000	1.0	0.12%	209.8	0.44%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.219e-02	1.0000	6.0	0.71%	671.4	1.40%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.195e-02	1.0000	114.0	13.46%	7636.7	15.90%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.182e-02	1.0000	63.0	7.44%	4492.6	9.35%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.121e-02	1.0000	19.0	2.24%	1627.1	3.39%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.870e-02	1.0000	2.0	0.24%	335.1	0.70%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.615e-02	1.0000	61.0	7.20%	4426.9	9.21%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.590e-02	1.0000	18.0	2.13%	1594.3	3.32%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-8.725e-03	1.0000	57.0	6.73%	4286.2	8.92%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.634e-03	1.0000	5.0	0.59%	797.8	1.66%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-2.990e-04	1.0000	65.0	7.67%	5359.0	11.15%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	77.4	0.16%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	9.5	0.02%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	4.7	0.01%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	52.3	0.11%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	9.1	0.02%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	9.7	0.02%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	6.7	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	12.8	0.03%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	41.9	0.09%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	9.5	0.02%