Information for 11-GCCATTGGCT (Motif 9)

T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T
Reverse Opposite:
C G T A A C T G T A G C A G T C C G T A T G C A C G A T A T C G C T A G A G T C
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.831
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif191.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets48.9 +/- 30.1bp
Average Position of motif in Background50.6 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCCATTGGCT
CCGATTGGCT
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCCATTGGCT---
-TGATTGGCTANN
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GCCATTGGCT
----TTGGCA
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCATTGGCT-
-CCATTGTTTT
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCCATTGGCT--
---NTTGGCANN
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCATTGGCT---
NNNCCATTGTGTNAN
 A C G T A C G T T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCATTGGCT-----
CTGATTGGTCNATTT
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCATTGGCT
NCCATTGTTY
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCATTGGCT-
-CCATTGTTYB
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCATTGGCT
CTCATTGTC-
 T C A G G A T C A T G C C G T A A C G T A C G T A C T G A T C G G T A C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T