Information for 2-GCNGCTACCTGAG (Motif 4)

A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C G A C T A G T C G T C A A C T G A T C G C G A T G C T A T A C G A G T C A C T G A C T G G T A C
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.728
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif18.52%
Number of Background Sequences with motif96.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets54.2 +/- 27.2bp
Average Position of motif in Background51.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCNGCTACCTGAG--
ACATGCTACCTAATAC
 A C G T A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCNGCTACCTGAG----
--RGSMTBCTGGGAAAT
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCNGCTACCTGAG
--RYHYACCTGB-
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G
A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCNGCTACCTGAG
-------GCTGTG
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCNGCTACCTGAG--
ACTTGCTACCTACACC
 A C G T A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCNGCTACCTGAG--
-----WDNCTGGGCA
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCNGCTACCTGAG
CAGCTGTTTCCT---
 A C G T A C G T A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCNGCTACCTGAG--
---GWAAYHTGABMC
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCNGCTACCTGAG-
GGCCYCCTGCTGDGH
 A C G T A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCNGCTACCTGAG
---ACTTCCTGTT
 A C T G A G T C A G T C A C T G A T G C C A G T C G T A A T G C G T A C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T