Information for 1-ARCTGWGGTGTCB (Motif 1)

C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
Reverse Opposite:
T G C A T A C G C T G A A G T C C G T A T A G C A G T C C G A T A G T C G T C A C A T G G A C T A G C T
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.635
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif29.63%
Number of Background Sequences with motif392.5
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets42.1 +/- 15.7bp
Average Position of motif in Background49.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ARCTGWGGTGTCB
-GCTGTGGTTT--
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB
--CTGTGGTTTN-
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB
NNHTGTGGTTWN-
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ARCTGWGGTGTCB
GTCTGTGGTTT--
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ARCTGWGGTGTCB----
-GCGGAGGTGTCGCCTC
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB
-NNTGTGGTTT--
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB--
-GATGACGTGGCANT
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T A C G T A C G T
A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB
-TTTGCGGTTT--
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ARCTGWGGTGTCB
--TTGCGGTTT--
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ARCTGWGGTGTCB
-GCTGTG------
 C T G A C T G A G T A C A C G T A C T G G C T A T A C G A C T G C G A T C T A G A G C T A T G C A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T