Information for 8-TATGTATGATGAT (Motif 23)

A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
Reverse Opposite:
G T C A C A G T A T G C G T C A G A C T A T G C G T C A A C G T C T G A A G T C G T C A A G C T T C G A
p-value:1e-6
log p-value:-1.601e+01
Information Content per bp:1.707
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif179.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets51.2 +/- 26.6bp
Average Position of motif in Background48.5 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TATGTATGATGAT
CTCATGAATATTCAT
 A C G T A C G T A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATGTATGATGAT
AATGTATCAAT--
 A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATGTATGATGAT-
AYATGYATATGCATR
 A C G T A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TATGTATGATGAT
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TATGTATGATGAT
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TATGTATGATGAT
-ATGAATATTC--
 A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TATGTATGATGAT
-AGGTGTGA----
 A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TATGTATGATGAT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TATGTATGATGAT
-AGGTGTGA----
 A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TATGTATGATGAT
-ATGACTCAT---
 A G C T C T G A A C G T A C T G G A C T T G C A A C G T T A C G C T G A A C G T A T C G G C T A A C G T
A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T