Information for 5-GGACAAAGCA (Motif 22)

A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A G T C A T G C
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.957
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.2 +/- 22.9bp
Average Position of motif in Background56.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAAGCA
GGAACAAAGR-
A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GGACAAAGCA--
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAAGCA
VRRACAAWGG-
A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGACAAAGCA
--ACAAAG--
A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAAGCA
AAAACAAAGG-
A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGACAAAGCA----
--ACAAAGGNBCCT
A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GGACAAAGCA---
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGACAAAGCA
-RACAAWGG-
A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGACAAAGCA
AAAACAATGG-
A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGACAAAGCA---
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A T C G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A