Information for 1-TRACACCYCA (Motif 16)

C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G C T A G C T A G A C T G C G A T A T C G A G C T A G C T C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.742
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif290.5
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets44.3 +/- 27.1bp
Average Position of motif in Background48.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TGACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TCACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TCACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TRACACCYCA--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TRACACCYCA
TTTCACACCTN-
 A C G T A C G T C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TCACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TRACACCYCA
KTTCACACCT--
 A C G T A C G T C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TCACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TRACACCYCA
TCACACCT--
 C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TRACACCYCA
ATTAACACCT--
 A C G T A C G T C G A T T C G A C T G A A T G C C G T A G T A C A G T C A G T C A G T C C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T