Information for 9-GSWKGGASAKASTGSG (Motif 11)

A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G
Reverse Opposite:
A G T C T A G C A T G C C G T A A T G C A C G T T G A C A C G T A T C G A G C T A G T C G A T C G T A C G C T A A T C G A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.833
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 23.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GSWKGGASAKASTGSG----
NANTGGAAAAANTGAGTCAN
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GSWKGGASAKASTGSG-
--VAGRACAKNCTGTBC
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T
A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG--
--NAGAACAGNCTGTNCT
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T
A C G T A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG---
---AGNACANNNTGTNCTN
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG---
----GRACAGWMTGTYCTB
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GSWKGGASAKASTGSG
CCAGGAACAG------
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GSWKGGASAKASTGSG
GGGCGGGAAGG------
 A C G T A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG----
---NNTNNACAATGGGANNN
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG---
----GAACADWATGTTCTT
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:GSWKGGASAKASTGSG
-------NNNANTGA-
 A C T G A T G C C G A T C A T G C T A G A C T G C T G A A T G C C G T A A C T G G T C A T A C G C G A T A T C G A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T