Information for 6-GTTCTGTGCTTTGCTG (Motif 9)

A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
Reverse Opposite:
A T G C C G T A C A T G G T A C C G T A T G C A C G T A C T A G G T A C G T C A G T A C C G T A A T C G T G C A T C G A T G A C
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.628
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif202.9
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets52.9 +/- 25.3bp
Average Position of motif in Background50.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTTCTGTGCTTTGCTG
NNNNTTGTGTGCTTNN---
 A C G T A C G T A C G T A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG
---CTGTTCCTGG---
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTTCTGTGCTTTGCTG
-GTCTGTGGTTT----
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTTCTGTGCTTTGCTG
--GCTGTG--------
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTCTGTGCTTTGCTG
--GCTGTGGTTT----
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG
---CTGTGGTTTN---
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG
---CTGACCTTTG---
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG
-NNHTGTGGTTWN---
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG-
NSTGTTTRCWCAGBNNN
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTTCTGTGCTTTGCTG
--NNTGTGGTTT----
 A C T G A G C T A C G T A T G C C G A T A C T G A C G T C A T G A G T C C G A T A C G T A C G T C A T G G T A C G C A T A T C G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T