Information for 5-TATTAAGATAACAAAG (Motif 7)

A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G
Reverse Opposite:
G T A C C G A T G A C T A C G T A T C G C G A T A G C T C G T A A C G T G A T C A G C T C G A T T C G A G T C A C G A T C G T A
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.678
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.8 +/- 18.7bp
Average Position of motif in Background46.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TATTAAGATAACAAAG--
---AAAAATAACAAACGG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TATTAAGATAACAAAG-----
----AGAAGAACAAAGGACTA
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TATTAAGATAACAAAG-----
----ATAAGAACAAAGGACTA
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TATTAAGATAACAAAG-
-------AAAACAAAGG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TATTAAGATAACAAAG
-ATTTGCATAACAATG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G
A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TATTAAGATAACAAAG
-CAAAAGTAAACAAAG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TATTAAGATAACAAAG-
-----AGAAACGAAAGT
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TATTAAGATAACAAAG
-ATTTGCATAACAAAG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TATTAAGATAACAAAG-
-----AAAGATCAAAGG
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TATTAAGATAACAAAG-
-------GGAACAAAGR
 A C G T C G T A C A G T A C G T G C T A C T G A C T A G T G C A C G A T C T G A G C T A T A G C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G