Information for 8-CAGAGTTRAG (Motif 40)

A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C C G T A C G T A G T A C C A G T G T A C A C G T C T A G
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.752
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif598.8
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets52.6 +/- 24.8bp
Average Position of motif in Background50.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTTRAG--
TATCATAATTAAGGA
 A C G T A C G T A C G T A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGAGTTRAG--
-ANAGATAAGAA
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGAGTTRAG--------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGAGTTRAG-
NNGAGATAAGA
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGAGTTRAG--
--NAGATAAGNN
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGAGTTRAG--
--CAGATAAGGN
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGAGTTRAG-
-NVAGATAAGR
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGAGTTRAG-----
TATAGAGATAAGAATTG
 A C G T A C G T A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGAGTTRAG-
---AGATAAGA
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGAGTTRAG-----
-NCAGATAAGAANNN
 A G T C C G T A C A T G G T C A C A T G G C A T A C G T T C A G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T