Information for 6-GGCCTCTAAT (Motif 38)

A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G C G T A A C T G A C T G A T G C A G T C
p-value:1e-8
log p-value:-1.850e+01
Information Content per bp:1.957
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 21.6bp
Average Position of motif in Background39.6 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCTAAT-
AGGTCTCTAACC
 A C G T A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGCCTCTAAT-
---CACTAATT
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCTAAT-
RGGGCACTAACY
 A C G T A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGCCTCTAAT---
-----NTAATTGN
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGCCTCTAAT----
----NNTAATTANN
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

PDX1/MA0132.2/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGCCTCTAAT---
-----CTAATTAN
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGCCTCTAAT----
----NTTAATTAGN
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

HOXB2/MA0902.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCCTCTAAT----
----NNTAATTANN
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCCTCTAAT---
-----NTAATTGG
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCCTCTAAT----
-----CTAATCGNT
 A C T G A T C G A G T C A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T