Information for 22-TTGCAAAWCAAAGTTG (Motif 37)

A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
Reverse Opposite:
A G T C T C G A C G T A G T A C C G A T A C G T C G A T T A C G G C T A G A C T A G C T A C G T C T A G A G T C T G C A C G T A
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.0 +/- 27.1bp
Average Position of motif in Background49.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAAAWCAAAGTTG
ATTTGCATAACAAAG---
 A C G T A C G T A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGCAAAWCAAAGTTG
ATTTGCATAACAATG---
 A C G T A C G T A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCAAAWCAAAGTTG
--GAAAGTGAAAGT--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGCAAAWCAAAGTTG
--GAAAGTGAAAGT--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGCAAAWCAAAGTTG
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGCAAAWCAAAGTTG
-AGAAAGTGAAAGTGA
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTGCAAAWCAAAGTTG
--GAAACTGAAACT--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTGCAAAWCAAAGTTG
--GRAASTGAAAST--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTGCAAAWCAAAGTTG
--GGAAGTGAAAST--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGCAAAWCAAAGTTG
--GAAAMTGAAACT--
 A C G T A C G T A C T G G A T C C G T A C T G A C G T A C G A T A G T C C G T A G T C A C G T A A C T G C G A T A G C T A C T G
A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T