Information for 9-CTGGACGTGACTG (Motif 23)

A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C G T A G T C G T C A G T A C A T C G A G C T A G T C T A G C C G T A A T C G
p-value:1e-9
log p-value:-2.073e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.1 +/- 19.5bp
Average Position of motif in Background52.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTGGACGTGACTG
----NCGTGACN-
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGGACGTGACTG
--NCACGTGACN-
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGGACGTGACTG-------
---TACGAGACTCCTCTAAC
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGGACGTGACTG
CGGTGACGTCAC--
 A C G T A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGGACGTGACTG
--GGACGTGC---
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGGACGTGACTG
---TACGTGCV--
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGGACGTGACTG-
--TCACGTGACCGG
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G A C G T
A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGGACGTGACTG
--NCACGTGACN-
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGACGTGACTG
-GTCACGTGAC--
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGGACGTGACTG
--RTACGTGC---
 A T G C C G A T A C T G A C T G C T G A A T G C A C T G A C G T A C T G C G T A A G T C A C G T A T C G
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T