Information for 2-TCCTAAGGCAGTCTGG (Motif 2)

A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G T C G A T G A C C A G T A C T G A G T C A G T C A G C T A G C T G C T A A C T G C T A G C T G A
p-value:1e-16
log p-value:-3.737e+01
Information Content per bp:1.744
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.1 +/- 27.6bp
Average Position of motif in Background45.3 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TCCTAAGGCAGTCTGG
--------CTGTCTGG
A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TCCTAAGGCAGTCTGG
------VBSYGTCTGG
A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TCCTAAGGCAGTCTGG---
---------GGTCTGGCAT
A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TCCTAAGGCAGTCTGG-----
------RGSMTBCTGGGAAAT
A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCCTAAGGCAGTCTGG-----
----NNTNNTGTCTGGNNTNG
A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCCTAAGGCAGTCTGG
TGCCCCAGGGCA------
A C G T A C G T A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCTAAGGCAGTCTGG
CCGCCCAAGGGCAG-----
A C G T A C G T A C G T A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCCTAAGGCAGTCTGG
TTGCCCTAGGGCAT-----
A C G T A C G T A C G T A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCCTAAGGCAGTCTGG
TGCCCCAGGGCA------
A C G T A C G T A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCTAAGGCAGTCTGG
AGCCTCAGGCA------
A C G T A G C T A G T C G T A C C G A T T C G A C T G A A C T G C T A G A G T C G C T A A C T G A C G T A G T C G C A T A C T G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T