Information for 7-CTRGGTGTMCWCM (Motif 18)

A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G C G A T A C T G A C T G C G T A G T A C C G T A A G T C A G T C A G C T C T G A A C T G
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 31.9bp
Average Position of motif in Background65.6 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTRGGTGTMCWCM-
GCGGAGGTGTCGCCTC
 A C G T A C G T A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTRGGTGTMCWCM
--AGGTGTCA---
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTRGGTGTMCWCM--
TNNNNGGTGTCATNTNT
 A C G T A C G T A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTRGGTGTMCWCM
--AGGTGTGA---
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTRGGTGTMCWCM----
NTNTATGTGCACATNNN
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTRGGTGTMCWCM
--AGGTGTGA---
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTRGGTGTMCWCM
GACAGGTGTN----
 A C G T A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTRGGTGTMCWCM----
NNGTATGTGCACATNNN
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTRGGTGTMCWCM
NTGGGTGTGGCC-
 A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTRGGTGTMCWCM
CGTGGGTGGTCC--
 A C G T A G T C A G C T C T G A A C T G A C T G A C G T A C T G A C G T G T A C A G T C C G T A A G T C G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T