Information for 5-CWMAGACTTGRWG (Motif 10)

A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
Reverse Opposite:
A T G C C G T A A G C T A G T C C G T A C G T A A C T G A C G T A G T C A C G T A C G T C G T A A C T G
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CWMAGACTTGRWG
-BCAGACWA----
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CWMAGACTTGRWG
---CCACTTGAA-
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CWMAGACTTGRWG
TGCTGTGATTT----
 A C G T A C G T A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CWMAGACTTGRWG
--ACCACTTGAA-
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CWMAGACTTGRWG
CNGTGATTTN---
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CWMAGACTTGRWG
-CCAGACRSVB--
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CWMAGACTTGRWG
---RTACGTGC--
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CWMAGACTTGRWG
GCAGTGATTT----
 A C G T A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CWMAGACTTGRWG---
-ANCCACCTGTTGCNC
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G A C G T A C G T A C G T
A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CWMAGACTTGRWG
-CCAGACAG----
 A G T C C G A T G T C A C G T A A C T G C G T A A G T C C G A T A C G T A C T G C T G A C G A T A T C G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T