Information for 5-TTCTGTTGYTGGGYGG (Motif 7)

A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
Reverse Opposite:
A G T C G T A C C T G A A G T C A G T C A G T C T C G A C T G A A G T C G C T A C G T A A G T C T G C A A C T G G T C A G T C A
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.693
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.6 +/- 26.9bp
Average Position of motif in Background69.7 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
--CTGTTGCTAGGS--
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
-NCCGTTGCTANGNGN
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG--
---KGTTGCTAGGMAACA
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
-TCNCCTGCTGNGNNN
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGTTGYTGGGYGG
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTCTGTTGYTGGGYGG----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
-TNTCCTGCTGTGNNG
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
NNNTGTTGTTGTTNG-
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTCTGTTGYTGGGYGG------
-----GTATTGGGTGGGTAATT
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTCTGTTGYTGGGYGG
-NNCGTTGCTATGGNN
 A C G T A C G T G T A C A C G T C T A G C G A T C G A T A C T G G A C T A G C T C T A G T C A G C T A G G A C T A C T G T C A G
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A