Information for 10-GGAAAGACACCACACA (Motif 18)

C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
Reverse Opposite:
A G C T A C T G A C G T A C T G A C G T A C T G A T C G C A G T A C T G A C G T A G T C A G C T A C G T A G C T A G T C A G T C
p-value:1e-10
log p-value:-2.415e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 31.2bp
Average Position of motif in Background25.4 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGAAAGACACCACACA-
-----NWAACCACADNN
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGAAAGACACCACACA-
------AAACCACAGAN
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGAAAGACACCACACA
------AAACCACANN
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGAAAGACACCACACA
------AAACCACAGC
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAAAGACACCACACA
AGAGRRACAGCWGAC-
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAAAGACACCACACA
-----NAAACCACAG-
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGACACCACACA
ATAAATGACACCTATCA
 A C G T C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAAAGACACCACACA-
-----GCGACCACACTG
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGAAAGACACCACACA
------AAACCGCAAA
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGAAAGACACCACACA-----
-----AGCGGCACACACGCAA
 C T A G T C A G T C G A C G T A C T G A C T A G G T C A G T A C G T C A A T G C G T A C C G T A T A G C T G C A A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A