Information for 9-ACTCTAGGCG (Motif 13)

T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G T G A C A T G C G C A T C G T A A C T G G T C A C A T G A G C T
p-value:1e-10
log p-value:-2.480e+01
Information Content per bp:1.841
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif34.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets62.5 +/- 24.3bp
Average Position of motif in Background50.3 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACTCTAGGCG-
---CTAGGCCT
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTCTAGGCG
TGTCTAGACG
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTCTAGGCG-
---CNAGGCCT
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTCTAGGCG-------
--CAAAGGCGTGGCCAG
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTCTAGGCG-------
NNNNTTGGCGCCGANNN
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACTCTAGGCG----
------GGCGCGCT
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTCTAGGCG--
ACCACTCTCGGTCAC
 A C G T A C G T A C G T T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACTCTAGGCG-------
NNNNTTGGCGCCGANNN
 T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTAGGCG--
NNAATTCTCGNTNAN
 A C G T A C G T A C G T T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACTCTAGGCG
RSCACTYRAG---
 A C G T A C G T A C G T T C G A G A T C A C G T A G T C A C G T C G T A A T C G A C T G A G T C A T C G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T