p-value: | 1e-12 |
log p-value: | -2.835e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.92% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 42.7 +/- 20.1bp |
Average Position of motif in Background | 35.0 +/- 23.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGAAGADCGVAC ATGAATATTC--- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------ATGAAGADCGVAC NNTNTCATGAATGT----- |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATGAAGADCGVAC ATATGCAAATNNN-- |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGAAGADCGVAC TATGCAAAT----- |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATGAAGADCGVAC TTATGCAAAT----- |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGAAGADCGVAC -NGAAGC------ |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGAAGADCGVAC CATGAC-------- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGAAGADCGVAC ATGMATATDC--- |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ATGAAGADCGVAC TATGCWAATBAV-- |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ATGAAGADCGVAC ATGCATAATTCA- |
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