Information for 14-AAHTCAMAGTRGATTH (Motif 25)

C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
Reverse Opposite:
C G T A C G T A C T G A C A G T G A T C G A T C G C T A T G A C A G C T A C T G C G A T A C T G C T G A C A T G G C A T A G C T
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.565
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif114.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets38.5 +/- 18.0bp
Average Position of motif in Background50.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAHTCAMAGTRGATTH
AAATCACAGCA-----
 C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAHTCAMAGTRGATTH
ACATCAAAGG------
 C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAHTCAMAGTRGATTH
ACATCAAAGGNA----
 C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAHTCAMAGTRGATTH
NNNAGATCAAAGGANNN--
 A C G T A C G T A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAHTCAMAGTRGATTH
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAHTCAMAGTRGATTH
AAAGATCAAAGGAA----
 A C G T A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAHTCAMAGTRGATTH
CAAATCACTG-------
 A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAHTCAMAGTRGATTH
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAHTCAMAGTRGATTH
ACWTCAAAGG------
 C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAHTCAMAGTRGATTH
NANAGATCAAAGGGNNN--
 A C G T A C G T A C G T C T G A C G T A G T A C A G C T G T A C G C T A T G A C T C G A A C T G C G A T C T A G C T A G G T C A A G C T G C A T G C A T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T