Information for 8-AAMATGGCTGCGY (Motif 8)

T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
Reverse Opposite:
T C A G G T A C T C A G A T G C T G C A A C T G T A G C A G T C C G T A A C G T A C T G A G C T A C G T
p-value:1e-12
log p-value:-2.790e+01
Information Content per bp:1.728
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif36.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.2 +/- 26.5bp
Average Position of motif in Background53.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAMATGGCTGCGY
CAAGATGGCGGC--
 A C G T T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAMATGGCTGCGY
CAAGATGGCGGC--
 A C G T T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAMATGGCTGCGY
-TAATGGCGGNC-
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAMATGGCTGCGY
---TWGTCTGV--
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AAMATGGCTGCGY
------GCTGTG-
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAMATGGCTGCGY--
-ACATGCCCGGGCAT
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAMATGGCTGCGY---
NAGANTGGCGGGGNGNA
 A C G T T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

TP53/MA0106.3/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAMATGGCTGCGY-----
GACATGCCCGGGCATGTT
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAMATGGCTGCGY
---CTGTCTGG--
 T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAMATGGCTGCGY
NNACTTGCCTT---
 A C G T T C G A C T G A T G A C G T C A C G A T C T A G A T C G A G T C A C G T A T C G A G T C A C T G A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T