Information for 7-AGTCAGGCCAGCG (Motif 6)

C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C C A G T A C T G A C T G A G T C A G T C A G C T A C T G G C T A A G T C G A C T
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.778
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.5 +/- 26.9bp
Average Position of motif in Background63.3 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGTCAGGCCAGCG----
---CAGGCCNNGGCCNN
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGTCAGGCCAGCG
--TRAGGTCA---
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGTCAGGCCAGCG
----AGGCCTNG-
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTCAGGCCAGCG
--CTAGGCCT---
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTCAGGCCAGCG-
---AAGGCAAGTGT
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGGCCAGCG
CNGTCACGCCAC--
 A C G T C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGTCAGGCCAGCG
----AGGTCA---
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGTCAGGCCAGCG
--TNNGGGCAG--
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTCAGGCCAGCG
---AAGGTCAC--
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTCAGGCCAGCG
-ATCACCCCAT--
 C G T A C T A G C G A T T A G C T C G A A C T G A C T G T A G C A G T C G C T A C T A G A G T C A C T G
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T