Information for 4-CCAWATATGGDCA (Motif 3)

A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
Reverse Opposite:
C G A T A T C G G T C A A G T C A G T C G C T A G C A T C G T A C G A T C G T A G C A T A C T G A T C G
p-value:1e-18
log p-value:-4.279e+01
Information Content per bp:1.707
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.5 +/- 24.9bp
Average Position of motif in Background47.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--CCAWATATGGDCA
TNCCATATATGG---
 A C G T A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCAWATATGGDCA
TGNCCATATATGGTCA
 A C G T A C G T A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CCAWATATGGDCA
TNCCATATATGGNA-
 A C G T A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CCAWATATGGDCA
CCATATATGG---
 A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCAWATATGGDCA
CCTTTTATAGNC-
 A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAWATATGGDCA
GCTATTTTTGGM--
 A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAWATATGGDCA
GGTCANYTGAGGWCA
 A C G T A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAWATATGGDCA
ACCATATGTT----
 A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAWATATGGDCA
AACCTTATAT-----
 A C G T A C G T A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCAWATATGGDCA
--ACATATGG---
 A T G C A G T C C G T A G C A T G C T A A C G T C G T A C A G T A C T G A C T G C A G T T A G C C G T A
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T