Information for 12-AGYCCACAGCAGC (Motif 13)

C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C
Reverse Opposite:
C T A G A G T C C G A T C A T G G T A C A C G T C T A G A G C T C A T G A C T G C T G A A G T C C G A T
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.719
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif74.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets42.1 +/- 24.9bp
Average Position of motif in Background50.3 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGYCCACAGCAGC
SSAATCCACANN---
 A C G T A C G T C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGYCCACAGCAGC----
-ATGTACAGTAGCAAAG
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGYCCACAGCAGC-----
-CTCAGCAGCTGCTACTG
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGYCCACAGCAGC----
-ATTTACAGTAGCAAAA
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGYCCACAGCAGC
TCCAATCCACA-----
 A C G T A C G T A C G T C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGYCCACAGCAGC
-ATCCAC------
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGYCCACAGCAGC--
---CAACGTCCGCGG
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGYCCACAGCAGC-
----CGCAGCTGCG
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGYCCACAGCAGC-
------CAGCTGNT
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGYCCACAGCAGC-
----AGCAGCTGCT
 C G T A C T A G A G C T A G T C G T A C T C G A A G T C T G C A A C T G G T A C G C T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T