Information for 1-GCTGCGCGGGAGCGCG (Motif 3)

A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
Reverse Opposite:
A G T C A C T G G T A C A T C G A T G C A C G T A T G C A G T C A T G C A C T G G T A C A T C G T G A C C G T A A C T G G T A C
p-value:1e-20
log p-value:-4.761e+01
Information Content per bp:1.835
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 18.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
---GGGCGGGACC---
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
---GGGCGGGAAGG--
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
---GGGCGGGAAGG--
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
-BTKGGCGGGAAA---
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
----GGCGGGAARN--
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCGCGGGAGCGCG
NNGCNCTGCGCGGC------
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCTGCGCGGGAGCGCG
-------CGGAGC---
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
-CTGCGCATGCGC---
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTGCGCGGGAGCGCG
--TGCGTGGGYG----
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCTGCGCGGGAGCGCG
-CTTCGCGGGGGGTC-
 A C T G A G T C A C G T A C T G A T G C A C T G G T A C A T C G A C T G A T C G C G T A A T C G A T G C A C T G G T A C A C T G
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T