Information for 9-GNAYATTGKTTTC (Motif 21)

C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A C G T A G T C A A T G C T G C A C T G A A C G T C T G A G C A T C A G T A G T C
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.671
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif311.7
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets46.4 +/- 20.8bp
Average Position of motif in Background51.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR3C2/MA0727.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GNAYATTGKTTTC--
GGGAACATTGTGTTCCC
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GNAYATTGKTTTC--
NGGAACATNATGTACCC
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GNAYATTGKTTTC
VAGRACAKWCTGTYC
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GNAYATTGKTTTC
AAGAACATWHTGTTC
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GNAYATTGKTTTC-
NAGNACANNNTGTNCT
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GNAYATTGKTTTC--
NGGTACACNGTGTTCCC
 A C G T A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GNAYATTGKTTTC--
AGNACAGNCTGTTCTN
 A C G T C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GNAYATTGKTTTC--
GVACAGNMTGTYCTB
 C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GNAYATTGKTTTC-
--ACTTTCGTTTCT
 C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GNAYATTGKTTTC---
------TGGTTTCAGT
 C T A G G T C A C G T A G A C T G T C A A G C T A C G T T A C G A C G T G C A T A C G T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T