Information for 3-GCGCAGTGGT (Motif 19)

C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T
Reverse Opposite:
G T C A G A T C A T G C G C T A G T A C A C G T T C A G T A G C C T A G G T A C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.674
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif266.1
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets49.8 +/- 24.2bp
Average Position of motif in Background49.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGCAGTGGT--
--GCTGTGGTTT
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCGCAGTGGT---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCGCAGTGGT---
---CTGTGGTTTN
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGCAGTGGT---
-NTCGGTGGTCGC
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGCAGTGGT--
--NNTGTGGTTT
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGCAGTGGT-
-TTRAGTGSYK
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGCAGTGGT---
-NNHTGTGGTTWN
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCGCAGTGGT-
-----GTGGAT
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGCAGTGGT--
-GTCTGTGGTTT
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCGCAGTGGT--
--GCAGTGATTT
 C A T G G A T C A T C G A G T C C G T A A C T G C G A T T A C G C T A G A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T