Information for 2-VAAGGAAGGGAACTGT (Motif 5)

T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A C T G A C G T A G C T A G T C A G T C G A T C C G A T A C G T G A T C A G T C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.785
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 22.2bp
Average Position of motif in Background50.8 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:VAAGGAAGGGAACTGT
-GAGAACCGAAACTG-
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-VAAGGAAGGGAACTGT
NDCAGGAARTNN-----
 A C G T T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:VAAGGAAGGGAACTGT
--AGAAACGAAAGT--
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:VAAGGAAGGGAACTGT
---AAAGRGGAAGTG-
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--VAAGGAAGGGAACTGT
AACAAGGAAGTAA-----
 A C G T A C G T T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:VAAGGAAGGGAACTGT
--TGGAACAGMA----
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-VAAGGAAGGGAACTGT
ANCAGGAAGT-------
 A C G T T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-VAAGGAAGGGAACTGT
AVCAGGAAGT-------
 A C G T T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:VAAGGAAGGGAACTGT
ACAGGAAGTG------
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:VAAGGAAGGGAACTGT
ACAGGAAGTG------
 T C G A C G T A C G T A A C T G C T A G C G T A C G T A C T A G C T A G C T A G T C G A G T C A A G T C C G A T A C T G A C G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T