Information for 7-CCTGCWRGATMAY (Motif 9)

A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T C G T A A C G T G T A C A G T C C G A T A T C G A G T C C G T A A C T G A C T G
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 13.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCTGCWRGATMAY-
------AGATAASR
 A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GATA5/MA0766.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCTGCWRGATMAY-
------AGATAAGA
 A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCTGCWRGATMAY
-----NGGATTAN
 A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCWRGATMAY
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCWRGATMAY
SNGCACCTGCHS------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTGCWRGATMAY----
--TGCTGAGTCATNNTG
 A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCWRGATMAY
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCWRGATMAY-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCWRGATMAY-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCTGCWRGATMAY-
----NBWGATAAGR
 A G T C A G T C A C G T A C T G A T G C C G T A C T A G A C T G C G T A A C G T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A