Information for 20-AGCCTTATAAGGC (Motif 40)

C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C G C A T
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.882
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 9.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGCCTTATAAGGC-
--CCATATATGGNA
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCCTTATAAGGC-
TTCCATATATGGAA
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCTTATAAGGC---
TAAACTGATAAGAAGAT
 A C G T C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCCTTATAAGGC-
--CCTTTTATAGNC
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCCTTATAAGGC
-NCCTTATCTG--
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCCTTATAAGGC
--CCYMATAAAA-
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCCTTATAAGGC
--NBWGATAAGR-
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

SRF/MA0083.3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCTTATAAGGC--
TGACCATATATGGTCA
 A C G T C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCCTTATAAGGC
--NVAGATAAGR-
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCCTTATAAGGC
--CCATATATGG-
 C G T A A C T G A G T C A G T C A C G T A G C T C G T A A C G T C T G A C G T A A C T G C T A G A G T C
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T