Information for 11-CCACTAGATGGCG (Motif 16)

A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G
Reverse Opposite:
A G T C A C T G A T G C A G T C G T C A A G C T G A T C C G A T C T G A A T C G C G A T A T C G A C T G
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.714
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets48.1 +/- 26.8bp
Average Position of motif in Background47.5 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGATGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGATGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGATGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCACTAGATGGCG---
-----TAATGGCGGNC
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGCG--
---CAAGATGGCGGC
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGCG--
---CAAGATGGCGGC
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGCG
--AACAGATGGC-
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGCG
--AACAGATGGT-
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCACTAGATGGCG-
------GATGACGT
 A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGATGGCG---
AAGGCCAGATGGTCCGG
 A C G T A G T C A T G C G C T A A T G C G A C T C G T A C T A G C T G A C A G T A C T G T A C G G T A C C T A G A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G